Bioinformatics Links Directory : WormThis section contains links to genome resources and databases for worms including the nematode, C. elegans.Ensembl C.elegans Genome Browser- (Found July 2, 2008 ) Access the data through the Ensembl user interface (both for visualisation and data mining) to provide cross-species integration throughout Ensembl's comparative genomics resources.http://www.ensembl.org/Caenorhabditis_elegans/ NEMBASE2- (Found July 2, 2008 ) NEMBASE2 is a database resource for EST datasets for 37 species of nematode. Sequences are clustered to redunce redundacy. Comparisons can be by library and at a sequence level; a visualisation tool is included. Coding region predictions for each cluster, further annotations such as GO terms and physical properties are also included.http://zeldia.cap.ed.ac.uk/nematodeESTs/nembase.html UCSC C. briggsae Genome Browser Gateway- (Found July 2, 2008 ) Provides a rapid and reliable display of any requested portion of the C. briggsae genome at any scale, together with dozens of aligned annotation tracks.http://genome.ucsc.edu/cgi-bin/hgGateway?org=C.+briggsae&db=0&hgsid=27736277 UCSC C. elegans Genome Browser Gateway- (Found July 2, 2008 ) Provides a rapid and reliable display of any requested portion of the C. elegans genome at any scale, together with dozens of aligned annotation tracks.http://genome.ucsc.edu/cgi-bin/hgGateway?org=C.+elegans&db=0&hgsid=27736277 WormBase- (Found July 2, 2008 ) Repository of mapping, sequencing and phenotypic information about C. elegans and C. briggsae.http://www.wormbase.org/ C. elegans Gene Knockout Consortium- July 2, 2008 Worldwide consortium whose ultimate goal is to produce null alleles of all known genes in the C. elegans genome; submit your gene to the knockout list.http://www.celeganskoconsortium.omrf.org/ |